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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5284992_5285657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5284992 - 5285657

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCACCAA

U12 Branch Point Sequence:

TGCCGCAGCACC

Flanking Amino Acid:

MAEAAAAPAELEGPGSAEQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

40.5

-0.5

1.3

40.7

39.5

Major PPT

83.4

0.75

0.9

77.3

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

36.5

-1

2.2

46.45

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996