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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5285782_5286334_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5285782 - 5286334

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGGTGAG

5'SS Class:

major

3'SS Sequence:

TATAATCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTCTTTTAATA

Flanking Amino Acid:

LAGTAAHGDGDSEEEIFVSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.3

63.2

43.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

0.9

70.9

40.2

Minor 5ss

26.1

-2.8

3.1

43.1

Minor BPS

68.8

0.59

1.1

72.9

32.7

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996