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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5286793_5287377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5286793 - 5287377

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCATGGCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AAATCCTTTATT

Flanking Amino Acid:

LKKEKKPRAEVDDGETHPFN

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.8

33.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

61.1

0.25

53.7

40.5

Minor 5ss

44.8

-0.6

3.2

66.9

44.3

Minor BPS

65.5

0.57

1.6

76.62

39.9

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996