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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5287543_5287879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5287543 - 5287879

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGTG

5'SS Class:

major

3'SS Sequence:

TTGGTTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TGTCAAATAAAT

Flanking Amino Acid:

AVKDKIKKYKGEGYKHVSDA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

62.3

42.1

Major BPS

65.7

0.39

71.3

30.3

Major PPT

68.6

0.42

1.1

67.5

42.8

Minor 5ss

-1.2

3.6

55.1

49.2

Minor BPS

44.7

-0.3

2.1

67.82

41.4

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996