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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5287949_5288193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5287949 - 5288193

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTGTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAG

U12 Branch Point Sequence:

TTTTTTGTTAAG

Flanking Amino Acid:

DPISKEPKRKERKAARLSKE

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

0.9

74.1

Major BPS

54.6

0.12

1.5

65.3

41.5

Major PPT

80.3

0.68

1.1

86.9

31.1

Minor 5ss

32.3

-2

3.4

45.9

49.3

Minor BPS

44.4

-0.5

2.3

59.36

42.7

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996