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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5288946_5289424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5288946 - 5289424

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AATGATTTAATT

Flanking Amino Acid:

MCEGNAMALLKSTNYQITLN

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

78.9

34.8

Major BPS

90.7

1.01

0.7

19.9

Major PPT

67.2

0.39

0.9

66.8

34.1

Minor 5ss

36.6

-1.5

3.3

50.4

39.9

Minor BPS

58.6

0.35

1.6

72.28

38.9

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996