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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5289967_5290655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5289967 - 5290655

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAATTG

5'SS Class:

major

3'SS Sequence:

TATGTATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATTAATA

Flanking Amino Acid:

INLDESDSNKELEALKARFL

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

67.5

38.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

80.3

0.68

0.9

73.3

40.8

Minor 5ss

-0.3

2.9

64.3

47.2

Minor BPS

63.7

0.43

1.7

76.37

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996