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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5290848_5291713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5290848 - 5291713

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTCTA

5'SS Class:

major

3'SS Sequence:

CATTTCTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AATATATTAATT

Flanking Amino Acid:

SVDETVHTKPGEKLQVLKAK

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

70.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.2

0.61

69.3

41.4

Minor 5ss

32.8

-2

3.1

41.5

44.9

Minor BPS

58.6

0.35

1.6

73.49

36.9

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996