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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5291899_5292483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5291899 - 5292483

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTATG

5'SS Class:

major

3'SS Sequence:

GGATGCTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TTTTTGTGGATG

Flanking Amino Acid:

ESEEEEGNHETLEYLLDEAE

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

75.6

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

63.8

0.31

59.2

42.7

Minor 5ss

41.8

-0.9

2.5

51.4

45.2

Minor BPS

47.3

-0.3

2.2

62.21

40.4

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996