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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5292690_5292822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5292690 - 5292822

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAATAAA

5'SS Class:

major

3'SS Sequence:

TATTTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTATTTAATT

Flanking Amino Acid:

MLFKDSSSKMGYSLPEEKLE

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

76.5

34.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.3

0.71

0.9

75.2

38.3

Minor 5ss

-1.8

2.8

33.4

Minor BPS

78.7

0.98

1.3

92.74

29.1

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996