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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5293512_5293988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5293512 - 5293988

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATATTTTTACCT

Flanking Amino Acid:

KTSFISSASKSSGKMSEPSL

Intron Amino Acid Position:

808

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

30.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.8

0.67

0.8

76.5

31.9

Minor 5ss

41.3

-1

3.3

58.3

46.6

Minor BPS

63.9

0.51

1.6

78.4

38.1

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996