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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5294150_5294245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5294150 - 5294245

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

GACTTTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GATTTTCTAATT

Flanking Amino Acid:

DTQSQLLDADGFLNVGQHRN

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.4

32.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.4

0.62

0.9

73.9

40.1

Minor 5ss

40.1

-1.1

2.8

44.3

43.6

Minor BPS

58.3

0.34

1.6

74.09

36.8

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996