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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5294473_5294626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5294473 - 5294626

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACGTCCT

5'SS Class:

major

3'SS Sequence:

TTACTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GTTATCTTACTT

Flanking Amino Acid:

NLCSGKFVSQTGSPTWASSA

Intron Amino Acid Position:

937

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.1

60.2

44.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

88.6

0.87

0.7

84.4

30.2

Minor 5ss

37.1

-1.5

3.2

47.5

41.9

Minor BPS

60.8

0.42

1.6

76.87

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996