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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5294742_5295124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5294742 - 5295124

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGCATT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTCATTTAATT

Flanking Amino Acid:

ALCSGSFPTDREEEDEEQEE

Intron Amino Acid Position:

975

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

36.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

74.8

0.56

0.8

69.9

35.7

Minor 5ss

41.7

-0.9

2.9

58.2

46.1

Minor BPS

71.2

0.74

1.4

86.41

33.1

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996