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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5295204_5295519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5295204 - 5295519

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCTCTTTGACA

Flanking Amino Acid:

TDDNAFDSEEDEKSRDSDAE

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.9

32.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.8

0.71

0.9

79.3

32.7

Minor 5ss

42.2

-0.9

2.8

58.8

45.4

Minor BPS

78.7

0.9

1.1

82.02

33.2

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996