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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5295615_5296242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5295615 - 5296242

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGTTCTTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTCTTTGATA

Flanking Amino Acid:

LRRRQGLKKKLNLQDFMEDE

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.1

0.57

72.7

37.6

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

0.78

1.1

78.69

31.2

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996