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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5296408_5296501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5296408 - 5296501

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTCAGTGAC

5'SS Class:

major

3'SS Sequence:

CTTGCGTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

CTTGCGTTAATA

Flanking Amino Acid:

ELGNQVQKLHMKVVLDDDKR

Intron Amino Acid Position:

1088

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.4

68.8

36.5

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

66.8

0.38

61.8

38.8

Minor 5ss

30.8

-2.2

3.1

39.9

39.1

Minor BPS

56.6

0.2

2.2

70.44

42.7

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996