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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5296624_5296825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5296624 - 5296825

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGACTGTC

5'SS Class:

major

3'SS Sequence:

TCTCTCTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGCTAGCTAACT

Flanking Amino Acid:

RMRKFRWKNIDDASQVDLFQ

Intron Amino Acid Position:

1129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

75.7

34.4

Major BPS

84.4

0.85

34.5

Major PPT

75.7

0.58

0.9

69.3

36.9

Minor 5ss

37.3

-1.4

3.3

45.2

Minor BPS

-0.2

2.4

70.52

45.7

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996