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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5296954_5297460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5296954 - 5297460

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAGTT

5'SS Class:

major

3'SS Sequence:

CTCTTTGCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TAAAATTGAAAA

Flanking Amino Acid:

FEREQWLREQKEKNEEEEED

Intron Amino Acid Position:

1172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

73.5

35.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

81.2

0.7

0.8

75.6

Minor 5ss

42.5

-0.8

3.5

64.9

46.4

Minor BPS

45.6

-0.3

1.7

54.1

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996

ENSAPLT00000010561

5284962 - 5299957

14996