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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5298722_5298932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5298722 - 5298932

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTGTTCTAATT

Flanking Amino Acid:

EEAKEKSKHQVKKRGPTAVI

Intron Amino Acid Position:

1287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.5

0.75

0.8

77.6

31.1

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

52.8

0.17

1.7

72.39

39.2

Associated Gene:

Gene:

CLSPN

Ensembl Gene ID:

ENSAPLG00000011178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011626

5284962 - 5299957

14996