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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5348054_5348488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5348054 - 5348488

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAA

U12 Branch Point Sequence:

TGTTACCAAATA

Flanking Amino Acid:

KNVQLYKMRNGYELSPTAAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

56.4

0.16

1.3

67.1

39.2

Major PPT

82.6

0.73

0.8

76.8

31.8

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

47.7

-0.1

2.1

65.96

40.3

Associated Gene:

Gene:

PSMB2

Ensembl Gene ID:

ENSAPLG00000010006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023093

5346109 - 5357204

11096

ENSAPLT00000010439

5347012 - 5357152

10141