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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5348560_5354396_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5348560 - 5354396

Intron Length:

5837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCTGGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCTGCTTTAATG

Flanking Amino Acid:

RNLADYLRSRTPYHVNLLLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

76.8

33.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

78.1

0.63

0.9

73.1

37.2

Minor 5ss

33.2

-1.9

2.8

38.8

40.3

Minor BPS

66.9

0.39

1.5

66.31

42.6

Associated Gene:

Gene:

PSMB2

Ensembl Gene ID:

ENSAPLG00000010006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023093

5346109 - 5357204

11096

ENSAPLT00000010439

5347012 - 5357152

10141