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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5354560_5356084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5354560 - 5356084

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CTCTAATTAAAT

Flanking Amino Acid:

LSILDRYYKPGITREEAVEL

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

86.5

0.82

0.9

84.6

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

51.6

0.13

1.9

71.49

44.8

Associated Gene:

Gene:

PSMB2

Ensembl Gene ID:

ENSAPLG00000010006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023093

5346109 - 5357204

11096

ENSAPLT00000010439

5347012 - 5357152

10141