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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5374073_5389873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5374073 - 5389873

Intron Length:

15801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTCTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

CCCTCCTTGTCT

Flanking Amino Acid:

NLLDQSVIKKVPIPSKANGT

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

72.5

37.3

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

77.2

0.61

0.8

68.5

37.3

Minor 5ss

30.7

-2.2

3.3

39.2

46.2

Minor BPS

45.7

-0.2

3.5

70.4

Associated Gene:

Gene:

TFAP2E

Ensembl Gene ID:

ENSAPLG00000010002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021163

5369911 - 5390828

20918

ENSAPLT00000020044

5369911 - 5390859

20949

ENSAPLT00000010409

5369911 - 5392175

22265