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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5396781_5397105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5396781 - 5397105

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCATCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCCTTTTCCATC

Flanking Amino Acid:

MMARVLASSAVLQETQSTKE

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.8

0.72

0.8

74.2

35.6

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

44.8

-0.4

1.8

52.75

40.2

Associated Gene:

Gene:

NCDN

Ensembl Gene ID:

ENSAPLG00000009984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018723

5395344 - 5400403

5060

ENSAPLT00000010391

5395216 - 5400403

5188