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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5413070_5415165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5413070 - 5415165

Intron Length:

2096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAACA

5'SS Class:

major

3'SS Sequence:

TTCTCCCTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTCTTTTAATT

Flanking Amino Acid:

VSPSTTATTPVVKELVVSAG

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

72.8

31.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.8

0.74

0.7

80.8

24.3

Minor 5ss

27.7

-2.6

2.8

32.3

41.9

Minor BPS

64.1

0.52

1.3

71.97

40.1

Associated Gene:

Gene:

KIAA0319L

Ensembl Gene ID:

ENSAPLG00000009379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009916

5402168 - 5433221

31054