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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5417479_5418726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5417479 - 5418726

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

GTCATCGTAACA

Flanking Amino Acid:

EGYVNVTVNPKPRVNRPPVA

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.5

27.6

Major BPS

0.65

1.1

77.4

37.3

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

36.7

-1.5

2.8

41.8

38.8

Minor BPS

50.3

0.01

2.1

64.15

42.3

Associated Gene:

Gene:

KIAA0319L

Ensembl Gene ID:

ENSAPLG00000009379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009916

5402168 - 5433221

31054