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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5420042_5420657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5420042 - 5420657

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCG

5'SS Class:

major

3'SS Sequence:

TGTTTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTCTCAGTACAT

Flanking Amino Acid:

NSKGKVMEMQGVRTPVLQLS

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.3

69.7

41.3

Major BPS

0.52

1.5

79.6

35.6

Major PPT

85.1

0.79

0.8

80.1

Minor 5ss

28.4

-2.5

2.9

33.2

41.8

Minor BPS

44.1

-0.3

2.5

70.06

46.5

Associated Gene:

Gene:

KIAA0319L

Ensembl Gene ID:

ENSAPLG00000009379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009916

5402168 - 5433221

31054