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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5420782_5421076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5420782 - 5421076

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

AATCCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAA

U12 Branch Point Sequence:

GTATGTGTAAAA

Flanking Amino Acid:

TAEVTVIVQPENNKPPKADA

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

0.2

1.2

65.3

38.6

Major PPT

80.8

0.69

0.8

77.5

35.8

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

43.9

-0.4

2.3

57.9

41.6

Associated Gene:

Gene:

KIAA0319L

Ensembl Gene ID:

ENSAPLG00000009379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009916

5402168 - 5433221

31054