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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5435779_5439633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5435779 - 5439633

Intron Length:

3855

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGTGGGGA

5'SS Class:

major

3'SS Sequence:

GTCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCAGAT

U12 Branch Point Sequence:

GGTAGCAGATGT

Flanking Amino Acid:

PPSLGAGGGGGLALLGAPAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

62.8

Major BPS

50.1

1.1

46.4

38.9

Major PPT

71.9

0.49

0.9

36.3

Minor 5ss

18.9

-3.6

3.9

28.5

43.8

Minor BPS

33.2

-1.2

2.2

48.38

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035960

5435637 - 5440336

4700