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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5439796_5440247_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5439796 - 5440247

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAT

U12 Branch Point Sequence:

CAGGCATCATGC

Flanking Amino Acid:

GSIVAVLPWLGAAGLSAGAQ

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

57.9

0.2

1.4

44.2

Major PPT

0.65

0.8

73.7

31.3

Minor 5ss

32.5

-2

2.8

43.2

43.8

Minor BPS

34.7

-1.1

36.4

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035960

5435637 - 5440336

4700