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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5446967_5448097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5446967 - 5448097

Intron Length:

1131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCGTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTGCGTTGACA

Flanking Amino Acid:

VRLYEFYLSKCSESVKQRSD

Intron Amino Acid Position:

1415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

72.9

0.52

1.1

68.3

42.2

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

60.9

0.34

2.2

78.22

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733