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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5449246_5450635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5449246 - 5450635

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGACAA

5'SS Class:

major

3'SS Sequence:

CCATTGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TTTTTGCCCATT

Flanking Amino Acid:

KIWEPTILPNGYMFSRIEEE

Intron Amino Acid Position:

1289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

60.5

40.1

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

70.3

0.46

0.9

61.8

39.8

Minor 5ss

-2.3

3.3

35.1

42.5

Minor BPS

39.4

-0.7

2.6

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733