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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5450748_5452064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5450748 - 5452064

Intron Length:

1317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATAAATT

Flanking Amino Acid:

ILYLCLGIQQYLFENGRIDN

Intron Amino Acid Position:

1252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.1

68.8

43.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

84.5

0.78

0.6

81.4

23.6

Minor 5ss

39.1

-1.2

2.9

49.5

46.7

Minor BPS

56.5

0.28

1.9

75.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733