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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5452663_5453914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5452663 - 5453914

Intron Length:

1252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GGCCCTTTAAAC

Flanking Amino Acid:

QEEQGDLKFSGVEYAALNSY

Intron Amino Acid Position:

1169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.2

33.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.7

0.58

79.6

26.4

Minor 5ss

49.1

-0.1

73.2

43.7

Minor BPS

0.17

1.4

58.8

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733