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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5454087_5454645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5454087 - 5454645

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TGAGCTTTAATT

Flanking Amino Acid:

RDGFPQPKRRGRKKSVVSVE

Intron Amino Acid Position:

1112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

71.6

40.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.6

0.73

0.7

78.3

30.6

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

68.3

0.65

1.4

77.22

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733