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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5454741_5455265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5454741 - 5455265

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

GATTTGACTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAATTCTTAATG

Flanking Amino Acid:

EQDLEADFPSDSFDPLSKGL

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

72.1

0.5

67.3

43.4

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

67.9

0.42

1.3

63.61

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733