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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5460040_5460336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5460040 - 5460336

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGACTA

5'SS Class:

major

3'SS Sequence:

TTCTTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTCTTCTTCACA

Flanking Amino Acid:

PTVNSNNVLQGAVPTVTAKI

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

62.6

43.8

Major BPS

0.62

1.1

77.2

Major PPT

87.5

0.84

0.7

83.3

25.2

Minor 5ss

33.7

-1.9

3.4

39.1

46.2

Minor BPS

68.4

0.57

1.7

78.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733