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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5461420_5461804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5461420 - 5461804

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATGTGTTTGATT

Flanking Amino Acid:

MSKFTVLFYQMAKCDGCKRQ

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

79.2

0.66

0.8

72.8

37.5

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

55.6

0.26

1.8

72.25

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733