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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5461841_5461886_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5461841 - 5461886

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCCAGAAT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTGCTCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAATCAC

U12 Branch Point Sequence:

TTCTGCTCAGAG

Flanking Amino Acid:

SYCLQTSPKLECMSKFTVLF

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.02

1.3

55.7

42.8

Major BPS

52.8

0.07

1.2

57.7

Major PPT

59.6

0.22

1.7

68.4

37.5

Minor 5ss

27.8

-2.6

3.3

36.6

42.6

Minor BPS

43.2

-0.6

2.2

52.81

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733