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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5461979_5462236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5461979 - 5462236

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTTTCTTCTAG

Flanking Amino Acid:

SGIDKTFCSEGCKLLYKHDL

Intron Amino Acid Position:

738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

91.4

0.93

0.6

85.5

29.2

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

-0.8

3.6

63.88

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733