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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5462388_5462874_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5462388 - 5462874

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAG

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAA

U12 Branch Point Sequence:

GAAACCAAAACA

Flanking Amino Acid:

ATKPELLDYKGKMFQFCGKT

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.5

37.1

Major BPS

67.1

0.42

37.9

Major PPT

68.7

0.42

1.1

60.8

44.7

Minor 5ss

32.9

-2

2.9

45.6

Minor BPS

46.6

-0.2

1.9

56.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733