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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5463390_5464052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5463390 - 5464052

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCACTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GTTGCATAAACC

Flanking Amino Acid:

AYRVKMVTSAGVQVQCNSCK

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

84.1

30.2

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

77.6

0.62

0.9

74.2

35.5

Minor 5ss

49.3

-0

2.5

67.2

43.9

Minor BPS

51.8

0.04

68.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733