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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5466323_5466437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5466323 - 5466437

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTGCA

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CTTGTTATATTT

Flanking Amino Acid:

KCSMCQKNAVIRHEVNYQNV

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

69.6

34.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

91.7

0.94

0.6

84.6

30.3

Minor 5ss

33.2

-1.9

3.1

38.9

41.3

Minor BPS

45.1

-0.2

1.9

63.23

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733