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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5468738_5469176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468738 - 5469176

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTCTAT

U12 Branch Point Sequence:

GTTACTCTATGT

Flanking Amino Acid:

AVFSVSGSPLAPQLSSGFQP

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.4

33.7

Major BPS

52.4

0.06

1.3

52.4

42.7

Major PPT

89.2

0.88

0.7

88.9

28.2

Minor 5ss

34.1

-1.8

3.3

45.4

43.9

Minor BPS

44.5

-0.3

2.1

66.04

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733