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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5472307_5472903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5472307 - 5472903

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATTA

Flanking Amino Acid:

APQTPETNFRESSYLFSSKE

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

74.9

38.1

Major BPS

100

1.24

0.5

100

Major PPT

80.6

0.69

0.9

77.5

Minor 5ss

45.1

-0.5

2.9

56.2

Minor BPS

58.4

0.26

1.8

75.69

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733