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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5472972_5474540_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5472972 - 5474540

Intron Length:

1569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTATATTTAATG

Flanking Amino Acid:

RLKSSFLDKAVHNQVEETLR

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

85.2

32.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

79.4

0.66

0.8

77.7

Minor 5ss

44.2

-0.6

3.3

66.9

44.4

Minor BPS

0.36

1.5

69.08

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003014

5446759 - 5475491

28733