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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5497130_5497401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5497130 - 5497401

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCGAC

U12 Branch Point Sequence:

TGGCTCCGACCC

Flanking Amino Acid:

GGGGEKLSDEGFKANLSLLR

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

48.6

-0

1.2

47.5

37.7

Major PPT

76.9

0.61

0.8

72.9

31.9

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

41.2

-0.6

1.9

49.97

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003739

5496473 - 5503856

7384