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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5498200_5499338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5498200 - 5499338

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGCACT

5'SS Class:

major

3'SS Sequence:

TTCCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTTAT

U12 Branch Point Sequence:

CCTGACCGAATA

Flanking Amino Acid:

KLAQKNPMYQKERETPPRFA

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

69.1

41.8

Major BPS

58.5

0.21

1.4

51.4

Major PPT

88.4

0.86

0.6

84.2

23.7

Minor 5ss

42.3

-0.8

3.2

58.5

40.2

Minor BPS

41.8

-0.6

1.9

49.48

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003739

5496473 - 5503856

7384