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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5499916_5500182_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5499916 - 5500182

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTCTG

5'SS Class:

major

3'SS Sequence:

TTGGGATGATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TGTAGTTTAACG

Flanking Amino Acid:

EMQKRKEIQLRQEEERRRRE

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

64.8

46.6

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

58.2

0.18

1.2

55.8

47.8

Minor 5ss

32.8

-2

3.1

41.2

45.2

Minor BPS

57.3

0.09

1.9

64.7

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003739

5496473 - 5503856

7384